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Deprecate FileCollection.add()

The method was never really working as expected, as in most cases it would throw UOE.

This also fixes a bug with PmdExtension.ruleSetFiles() always throwing the aforementioned UOE exception.

  1. … 8 more files in changeset.
Some unit test coverage for handling of task dependencies for various FileCollection implementations.

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    • +90
  1. … 3 more files in changeset.